FUGE bioinformatics platform FUGE
 
Platform partners:
UiB
UiO
NTNU
Research:
Recent publications
Online tools:
BOMP
ELM
Ka/Ks calculation
LIPO
Pratt
RegExpMaker
Spratt
WEBnm@
TMM@
XHM
ParAlign
Stitchprofiles
Genetools
siRNA
TargetBoost
BLAST
preAssemble

bioportal.uio.no
Databases:
CHRABCHRAB
TAEDTAED
PubGenePubgene
repairGenesrepairGenes
Software:
J-Express
Phyrex
SciCraft
Softparsmap
MassSorter
RBR and xsact
Widget Toolbox:
Alignment Conversion
Sequence Conversion
Tree Conversion
Alignment to coding
Site map
Title

1. Submit your TM protein
  • at the PDB format:
  • or use a PDB ID:
  • 2. Choose number of modes to calculate:


    TMM@ performs normal modes calculations on your TM protein, and identifies the most mobile helices in terms of rotation, translation, and slide of the helices. It also identifies if the TM alpha helical bundle has a tendency to rotate around its own axis.


    Retrieve previous calculation

    Insert your Job ID:

    Problem report : If you meet any problem, please report it to contact@bioinfo.no. Attach to your email the pdb file you submitted and explain in details the problem you encountered.

    Tutorial : a step by step guide through the use of TMM@

    We recommend to use Firefox to view this page correctly.


    Lars Skjærven and Nathalie Reuter
    Computational Biology Unit/BCCS - UiB 2006
    contact@bioinfo.no
    last update: Sept. 1st, 2006