Recent publications
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Korkmaz, B.; Hajjar, E.; Kalupov, T.; Reuter, N.; Bourdet, M.B.; Moreau, T.; Juliano, L. & Gauthier, F.
Influence of charge distribution at the active site surface on the substrate specificity of human neutrophil protease 3 and elastase. A kinetic and molecular modeling analysis.
J Biol Chem,
2007, 282,
1989-1997
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Lindqvist, C.; Laakkonen, L. & Albert, V.A.
Polyglutamine variation in a flowering time protein correlates with island age in a Hawaiian plant radiation.
BMC Evol Biol,
2007, 7,
105
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Skjaerven, L.; Jonassen, I. & Reuter, N.
TMM@: a web application for the analysis of transmembrane helix mobility.
BMC Bioinformatics,
2007, 8,
232
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Soltis, D.E.; Ma, H.; Frohlich, M.W.; Soltis, P.S.; Albert, V.A.; Oppenheimer, D.G.; Altman, N.S.; Depamphilis, C. & Mack, J.L.
The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression.
Trends Plant Sci,
2007, 12,
358-367
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Andersen, M.; Lenhard, B.; Whatling, C.; Eriksson, P. & Odeberg, J.
Alternative promoter usage of the membrane glycoprotein CD36.
BMC Mol Biol,
2006, 7,
8
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Barsnes, H.; Mikalsen, S. & Eidhammer, I.
MassSorter: a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences.
BMC Bioinformatics,
2006, 7,
42
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Berven, F.S.; Karlsen, O.A.; Straume, A.H.; Flikka, K.; Murrell, J.C.; Fjellbirkeland, A.; Lillehaug, J.R.; Eidhammer, I. & Jensen, H.B.
Analysing the outer membrane subproteome of Methylococcus capsulatus (Bath) using proteomics and novel biocomputing tools.
Arch Microbiol,
2006, 184,
362-377
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Carninci, P.; Sandelin, A.; Lenhard, B.; Katayama, S.; Shimokawa, K.; Ponjavic, J.; Semple, C.A.M.; Taylor, M.S.; Engström, P.G.; Frith, M.C.; Forrest, A.R.R.; Alkema, W.B.; Tan, S.L.; Plessy, C.; Kodzius, R.; Ravasi, T.; Kasukawa, T.; Fukuda, S.; Katayama, M.K.; Kitazume, Y.; Kawaji, H.; Kai, C.; Nakamura, M.; Konno, H.; Nakano, K.; Tabar, S.M.; Arner, P.; Chesi, A.; Gustincich, S.; Persichetti, F.; Suzuki, H.; Grimmond, S.M.; Wells, C.A.; Orlando, V.; Wahlestedt, C.; Liu, E.T.; Harbers, M.; Kawai, J.; Bajic, V.B.; Hume, D.A. & Hayashizaki, Y.
Genome-wide analysis of mammalian promoter architecture and evolution.
Nat Genet,
2006, 38,
626-635
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Cui, L.; Wall, P.K.; Mack, J.H.L.; Lindsay, B.G.; Soltis, D.E.; Doyle, J.J.; Soltis, P.S.; Carlson, J.E.; Arumuganathan, K.; Barakat, A.; Albert, V.A.; Ma, H. & dePamphilis, C.W.
Widespread genome duplications throughout the history of flowering plants.
Genome Res,
2006, 16,
738-749
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Dysvik, B.; Vasstrand, E.N.; Løvlie, R.; Elgindi, O.A.; Kross, K.W.; Aarstad, H.J.; Johannessen, A.C.; Jonassen, I. & Ibrahim, S.O.
Gene expression profiles of head and neck carcinomas from Sudanese and Norwegian patients reveal common biological pathways regardless of race and lifestyle.
Clin Cancer Res,
2006, 12,
1109-1120
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Engstrom, P.G.; Suzuki, H.; Ninomiya, N.; Akalin, A.; Sessa, L.; Lavorgna, G.; Brozzi, A.; Luzi, L.; Tan, S.L.; Yang, L.; Kunarso, G.; Ng, E.L.; Batalov, S.; Wahlestedt, C.; Kai, C.; Kawai, J.; Carninci, P.; Hayashizaki, Y.; Wells, C.; Bajic, V.B.; Orlando, V.; Reid, J.F.; Lenhard, B. & Lipovich, L.
Complex Loci in human and mouse genomes.
PLoS Genet,
2006, 2,
e47
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Flikka, K.; Martens, L.; Vandekerckhove, J.; Gevaert, K. & Eidhammer, I.
Improving the reliability and throughput of mass spectrometry-based proteomics by spectrum quality filtering.
Proteomics,
2006, 6,
2086-2094
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Fredman, D.; Sawyer, S.L.; Strömqvist, L.; Tabar, S.M.; Kidd, K.K.; Wahlestedt, C.; Chanock, S.J. & Brookes, A.J.
Nonsynonymous SNPs: validation characteristics, derived allele frequency patterns, and suggestive evidence for natural selection.
Hum Mutat,
2006, 27,
173-186
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Frith, M.C.; Ponjavic, J.; Fredman, D.; Kai, C.; Kawai, J.; Carninci, P.; Hayshizaki, Y. & Sandelin, A.
Evolutionary turnover of mammalian transcription start sites.
Genome Res,
2006, 16,
713-722
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Hajjar, E.; Korkmaz, B.; Gauthier, F.; Brandsdal, B.O.; Sarsat, V.W. & Reuter, N.
Inspection of the binding sites of proteinase3 for the design of a highly specific substrate.
J Med Chem,
2006, 49,
1248-1260
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Jonassen, I.; Klose, D. & Taylor, W.R.
Protein model refinement using structural fragment tessellation.
Comput Biol Chem,
2006, 30,
360-366
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Laakkonen, L.; Jobson, R.W. & Albert, V.A.
A new model for the evolution of carnivory in the bladderwort plant (utricularia): adaptive changes in cytochrome C oxidase (COX) provide respiratory power.
Plant Biol (Stuttg),
2006, 8,
758-764
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Laitinen, R.; Broholm, S.; Albert, V.; Teeri, T. & Elomaa, P.
Patterns of MADS-box gene expression mark flower-type development in Gerbera hybrida (Asteraceae).
BMC Plant Biol,
2006, 6,
11
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Lindqvist, C.; Scheen, A.; Yoo, M.; Grey, P.; Oppenheimer, D.G.; Mack, J.H.L.; Soltis, D.E.; Soltis, P.S. & Albert, V.A.
An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers.
BMC Plant Biol,
2006, 6,
16
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Maeda, N.; Kasukawa, T.; Oyama, R.; Gough, J.; Frith, M.; Engström, P.G.; Lenhard, B.; Aturaliya, R.N.; Batalov, S.; Beisel, K.W.; Bult, C.J.; Fletcher, C.F.; Forrest, A.R.R.; Furuno, M.; Hill, D.; Itoh, M.; Katayama, M.K.; Katayama, S.; Katoh, M.; Kawashima, T.; Quackenbush, J.; Ravasi, T.; Ring, B.Z.; Shibata, K.; Sugiura, K.; Takenaka, Y.; Teasdale, R.D.; Wells, C.A.; Zhu, Y.; Kai, C.; Kawai, J.; Hume, D.A.; Carninci, P. & Hayashizaki, Y.
Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs.
PLoS Genet,
2006, 2,
e62
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Malde, K. & Giegerich, R.
Calculating PSSM probabilities with lazy dynamic programming
J. Funct. Program.,
Cambridge University Press,
2006, 16,
75-81
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Oyan, A.M.; Bø, T.H.; Jonassen, I.; Gjertsen, B.T.; Bruserud, Ø. & Kalland, K.
cDNA microarray analysis of non-selected cases of acute myeloid leukemia demonstrates distinct clustering independent of cytogenetic aberrations and consistent with morphological signs of differentiation.
Int J Oncol,
2006, 28,
1065-80
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Rastogi, S.; Reuter, N. & Liberles, D.A.
Evaluation of models for the evolution of protein sequences and functions under structural constraint.
Biophys Chem,
2006, 124,
134-144
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Rayner, T.; Serra, P.R.; Spellman, P.; Causton, H.; Farne, A.; Holloway, E.; Irizarry, R.; Liu, J.; Maier, D.; Miller, M.; Petersen, K.; Quackenbush, J.; Sherlock, G.; Stoeckert, C.; White, J.; Whetzel, P.; Wymore, F.; Parkinson, H.; Sarkans, U.; Ball, C. & Brazma, A.
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
BMC Bioinformatics,
2006, 7,
489
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Saetrom, P.; Snøve, O.; Nedland, M.; Grünfeld, T.B.; Lin, Y.; Bass, M.B. & Canon, J.R.
Conserved microRNA characteristics in mammals.
Oligonucleotides,
2006, 16,
115-144
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Sakariassen, P.O.; Prestegarden, L.; Wang, J.; Skaftnesmo, K.; Mahesparan, R.; Molthoff, C.; Sminia, P.; Sundlisæter, E.; Misra, A.; Tysnes, B.B.; Chekenya, M.; Peters, H.; Lende, G.; Kalland, K.H.; Oyan, A.M.; Petersen, K.; Jonassen, I.; van der Kogel, A.; Feuerstein, B.G.; Terzis, A.J.A.; Bjerkvig, R. & Enger, P.O.
Angiogenesis-independent tumor growth mediated by stem-like cancer cells.
Proc Natl Acad Sci U S A,
2006
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Skarmeta, J.L.G.; Lenhard, B. & Becker, T.S.
New technologies, new findings, and new concepts in the study of vertebrate cis-regulatory sequences.
Dev Dyn,
2006, 235,
870-885
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Snove, O. & Rossi, J.
Toxicity in mice expressing short hairpin RNAs gives new insight into RNAi.
Genome Biol,
2006, 7,
231
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Snove, O. & Rossi, J.J.
Chemical Modifications Rescue Off-Target Effects of RNAi
JJ. ACS Chem. Biol.,
2006, 1,
274–276
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Snove, O. & Rossi, J.J.
Expressing short hairpin RNAs in vivo.
Nat Methods,
2006, 3,
689-695
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Taylor, W.R.; Lin, K.; Klose, D.; Fraternali, F. & Jonassen, I.
Dynamic domain threading.
Proteins,
2006
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Teeri, T.H.; Elomaa, P.; Kotilainen, M. & Albert, V.A.
Mining plant diversity: Gerbera as a model system for plant developmental and biosynthetic research.
Bioessays,
2006, 28,
756-767
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Teeri, T.H.; Kotilainen, M.; Uimari, A.; Ruokolainen, S.; Ng, Y.; Malm, U.; Pollanen, E.; Broholm, S.; Laitinen, R.; Elomaa, P. & Albert, V.A.
Floral developmental genetics of Gerbera (Asteraceae). In
Soltis, D.E.; Mack, J.H.L. & Soltis, P.S. (ed.)
Developmental Genetics of the Flower, Advances in Botanical Research 44.
Elsevier, London.,
2006
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Vlieghe, D.; Sandelin, A.; Bleser, P.J.D.; Vleminckx, K.; Wasserman, W.W.; van Roy, F. & Lenhard, B.
A new generation of JASPAR, the open-access repository for transcription factor binding site profiles.
Nucleic Acids Res,
2006, 34,
D95-D97
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Yoo, M.; Albert, V.; Soltis, P. & Soltis, D.
Phylogenetic diversification of glycogen synthase kinase 3/SHAGGY-like kinasegenes in plants.
BMC Plant Biol,
2006, 6,
3
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Albert, V.A.; Soltis, D.E.; Carlson, J.E.; Farmerie, W.G.; Wall, P.K.; Ilut, D.C.; Solow, T.M.; Mueller, L.A.; Landherr, L.L.; Hu, Y.; Buzgo, M.; Kim, S.; Yoo, M.; Frohlich, M.W.; Treves, R.P.; Schlarbaum, S.E.; Bliss, B.J.; Zhang, X.; Tanksley, S.D.; Oppenheimer, D.G.; Soltis, P.S.; Ma, H.; DePamphilis, C.W. & Mack, J.H.L.
Floral gene resources from basal angiosperms for comparative genomics research.
BMC Plant Biol,
2005, 5,
5
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Bratlie, M.S. & Drabløs, F.
Bioinformatic mapping of AlkB homology domains in viruses.
BMC Genomics,
2005, 6,
1
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Dublet, B.; Ruello, A.; Pederzoli, M.; Hajjar, E.; Courbebaisse, M.; Canteloup, S.; Reuter, N. & Sarsat, V.W.
Cleavage of p21/WAF1/CIP1 by proteinase 3 modulates differentiation of a monocytic cell line. Molecular analysis of the cleavage site.
J Biol Chem,
2005, 280,
30242-30253
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Halvorsen, O.J.; Oyan, A.M.; Bø, T.H.; Olsen, S.; Rostad, K.; Haukaas, S.A.; Bakke, A.M.; Marzolf, B.; Dimitrov, K.; Stordrange, L.; Lin, B.; Jonassen, I.; Hood, L.; Akslen, L.A. & Kalland, K.
Gene expression profiles in prostate cancer: association with patient subgroups and tumour differentiation.
Int J Oncol,
2005, 26,
329-36
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Hinsen, K.; Reuter, N.; Navaza, J.; Stokes, D.L. & Lacapère, J.
Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase.
Biophys J,
2005, 88,
818-27
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Hjelmervik, T.O.R.; Petersen, K.; Jonassen, I.; Jonsson, R. & Bolstad, A.I.
Gene expression profiling of minor salivary glands clearly distinguishes primary Sjögren's syndrome patients from healthy control subjects.
Arthritis Rheum,
2005, 52,
1534-1544
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Hollup, S.M.; Salensminde, G. & Reuter, N.
WEBnm@: a web application for normal mode analyses of proteins.
BMC Bioinformatics,
2005, 6,
52
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Katayama, S.; Tomaru, Y.; Kasukawa, T.; Waki, K.; Nakanishi, M.; Nakamura, M.; Nishida, H.; Yap, C.C.; Suzuki, M.; Kawai, J.; Suzuki, H.; Carninci, P.; Hayashizaki, Y.; Wells, C.; Frith, M.; Ravasi, T.; Pang, K.C.; Hallinan, J.; Mattick, J.; Hume, D.A.; Lipovich, L.; Batalov, S.; Engström, P.G.; Mizuno, Y.; Faghihi, M.A.; Sandelin, A.; Chalk, A.M.; Tabar, S.M.; Liang, Z.; Lenhard, B.; Wahlestedt, C.; Group, R.I.K.E.N.G.E.R.; Group), G.S.G.(.N.P.C. & Consortium, F.A.N.T.O.M.
Antisense transcription in the mammalian transcriptome.
Science,
2005, 309,
1564-1566
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Malde, K.; Coward, E. & Jonassen, I.
A graph based algorithm for generating EST consensus sequences.
Bioinformatics,
2005, 21,
1371-5
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Oyan, A.M.; Bø, T.H.; Jonassen, I.; Ulvestad, E.; Gjertsen, B.T.; Kalland, K. & Bruserud, O.
CD34 expression in native human acute myelogenous leukemia blasts: differences in CD34 membrane molecule expression are associated with different gene expression profiles.
Cytometry B Clin Cytom,
2005, 64,
18-27
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Pánek, J.; Eidhammer, I. & Aasland, R.
A new method for identification of protein (sub)families in a set of proteins based on hydropathy distribution in proteins.
Proteins,
2005, 58,
923-934
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Rastogi, S. & Liberles, D.
Subfunctionalization of duplicated genes as a transition state to neofunctionalization.
BMC Evol Biol,
2005, 5,
28
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Rossnes, R.; Eidhammer, I. & Liberles, D.A.
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data.
BMC Bioinformatics,
2005, 6,
127
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Roth, C.; Betts, M.J.; Steffansson, P.; Saelensminde, G. & Liberles, D.A.
The Adaptive Evolution Database (TAED): a phylogeny based tool for comparative genomics.
Nucleic Acids Res,
2005, 33,
D495-7
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Saetrom, O.; Snove, O. & Saetrom, P.
Weighted sequence motifs as an improved seeding step in microRNA target prediction algorithms.
RNA,
2005
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Schneeberger, K.; Malde, K.; Coward, E. & Jonassen, I.
Masking repeats while clustering ESTs.
Nucleic Acids Res,
2005, 33,
2176-80
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Albert, V. (ed.)
Parsimony, Phylogeny, and Genomics
Oxford Univ. Press,
2005
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Alsberg, B.K.; Kirkhus, L.; Tangstad, T. & Anderssen, E.
Data Analysis of Microarrays Using SciCraft
2004, 3303,
58
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Berven, F.S.; Flikka, K.; Jensen, H.B. & Eidhammer, I.
BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria.
Nucleic Acids Res,
2004, 32,
W394-W399
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Bjerkan, T.M.; Bender, C.L.; Ertesvåg, H.; Drabløs, F.; Fakhr, M.K.; Preston, L.A.; Braek, G.S. & Valla, S.
The Pseudomonas syringae genome encodes a combined mannuronan C-5-epimerase and O-acetylhydrolase, which strongly enhances the predicted gel-forming properties of alginates.
J Biol Chem,
2004, 279,
28920-9
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Braun, F.N. & Liberles, D.A.
Repeat-modulated population genetic effects in fungal proteins.
J Mol Evol,
2004, 59,
97-102
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Brehm, A.; Tufteland, K.R.; Aasland, R. & Becker, P.B.
The many colours of chromodomains.
Bioessays,
2004, 26,
133-40
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Bø, T.H.; Dysvik, B. & Jonassen, I.
LSimpute: accurate estimation of missing values in microarray data with least squares methods.
Nucleic Acids Res,
2004, 32,
e34
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Davidsen, T.; Rødland, E.A.; Lagesen, K.; Seeberg, E.; Rognes, T. & Tønjum, T.
Biased distribution of DNA uptake sequences towards genome maintenance genes.
Nucleic Acids Res,
2004, 32,
1050-8
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Dichtl, B.; Aasland, R. & Keller, W.
Functions for S. cerevisiae Swd2p in 3' end formation of specific mRNAs and snoRNAs and global histone 3 lysine 4 methylation.
RNA,
2004, 10,
965-77
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Drabløs, F.; Feyzi, E.; Aas, P.A.; Vaagbø, C.B.; Kavli, B.; Bratlie, M.S.; Diaz, J.P.; Otterlei, M.; Slupphaug, G. & Krokan, H.E.
Alkylation damage in DNA and RNA--repair mechanisms and medical significance.
DNA Repair (Amst),
2004, 3,
1389-407
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Flikka, K.; Yadetie, F.; Laegreid, A. & Jonassen, I.
XHM: a system for detection of potential cross hybridizations in DNA microarrays.
BMC Bioinformatics,
2004, 5,
117
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Halaas, A.; Svingen, B.; Nedland, M.; Sætrom, P.; Ola Snøve, J. & Birkeland, O.R.
A recursive MISD architecture for pattern matching
IEEE Trans. Very Large Scale Integr. Syst.,
IEEE Educational Activities Department,
2004, 12,
727-734
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Hughes, T.; Hyun, Y. & Liberles, D.A.
Visualising very large phylogenetic trees in three dimensional hyperbolic space.
BMC Bioinformatics,
2004, 5,
48
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Jobson, R.W.; Nielsen, R.; Laakkonen, L.; Wikström, M. & Albert, V.A.
Adaptive evolution of cytochrome c oxidase: Infrastructure for a carnivorous plant radiation.
Proc Natl Acad Sci U S A,
2004, 101,
18064-8
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Kim, S.; Yoo, M.; Albert, V.A.; Farris, J.S.; Soltis, P.S. & Soltis, D.E.
Phylogeny and diversification of B-function MADS-box genes in angiosperms: evolutionary and functional implications of a 260-million-year-old duplication
Am. J. Bot.,
2004, 91,
2102-2118
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Lyng, H.; Badiee, A.; Svendsrud, D.H.; Hovig, E.; Myklebost, O. & Stokke, T.
Profound influence of microarray scanner characteristics on gene expression ratios: analysis and procedure for correction.
BMC Genomics,
2004, 5,
10
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Saetrom, P.
Predicting the efficacy of short oligonucleotides in antisense and RNAi experiments with boosted genetic programming.
Bioinformatics,
2004, 20,
3055-63
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Saetrom, P. & Snøve, O.
A comparison of siRNA efficacy predictors.
Biochem Biophys Res Commun,
2004, 321,
247-53
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Snøve, O. & Holen, T.
Many commonly used siRNAs risk off-target activity.
Biochem Biophys Res Commun,
2004, 319,
256-63
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Snøve, O.; Nedland, M.; Fjeldstad, S.H.; Humberset, H.; Birkeland, O.R.; Grünfeld, T. & Saetrom, P.
Designing effective siRNAs with off-target control.
Biochem Biophys Res Commun,
2004, 325,
769-73
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Soltis, D.E.; Albert, V.A.; Savolainen, V.; Hilu, K.; Qiu, Y.; Chase, M.W.; Farris, J.S.; Stefanovi?, S.; Rice, D.W.; Palmer, J.D. & Soltis, P.S.
Genome-scale data, angiosperm relationships, and "ending incongruence": a cautionary tale in phylogenetics.
Trends Plant Sci,
2004, 9,
477-83
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Taylor, W.R. & Jonassen, I.
A structural pattern-based method for protein fold recognition.
Proteins,
2004, 56,
222-34
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Uimari, A.; Kotilainen, M.; Elomaa, P.; Yu, D.; Albert, V.A. & Teeri, T.H.
Integration of reproductive meristem fates by a SEPALLATA-like MADS-box gene.
Proc Natl Acad Sci U S A,
2004, 101,
15817-22
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Ussery, D.W.; Hallin, P.F.; Lagesen, K. & Coenye, T.
Genome update: rRNAs in sequenced microbial genomes.
Microbiology,
2004, 150,
1113-5
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Ussery, D.W.; Hallin, P.F.; Lagesen, K. & Wassenaar, T.M.
Genome update: tRNAs in sequenced microbial genomes.
Microbiology,
2004, 150,
1603-6
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Wieman, H.; Tøndel, K.; Anderssen, E. & Drabløs, F.
Homology-based modelling of targets for rational drug design.
Mini Rev Med Chem,
2004, 4,
793-804
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Alsberg, B.K.; Kirkhus, L.; Hagen, R.; Knudsen, O.; Tangstad, T. & Anderssen, E.
Zherlock: an open source data analysis software.
SAR QSAR Environ Res,
2003, 14,
349-60
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Braun, F.N. & Liberles, D.A.
Retention of enzyme gene duplicates by subfunctionalization.
Int J Biol Macromol,
2003, 33,
19-22
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Elomaa, P.; Uimari, A.; Mehto, M.; Albert, V.A.; Laitinen, R.A.E. & Teeri, T.H.
Activation of anthocyanin biosynthesis in Gerbera hybrida (Asteraceae) suggests conserved protein-protein and protein-promoter interactions between the anciently diverged monocots and eudicots.
Plant Physiol,
2003, 133,
1831-42
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Falnes, P.Ø. & Rognes, T.
DNA repair by bacterial AlkB proteins.
Res Microbiol,
2003, 154,
531-8
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Malde, K.; Coward, E. & Jonassen, I.
Fast sequence clustering using a suffix array algorithm.
Bioinformatics,
2003, 19,
1221-6
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Mazet, F.; Yu, J.K.; Liberles, D.A.; Holland, L.Z. & Shimeld, S.M.
Phylogenetic relationships of the Fox (Forkhead) gene family in the Bilateria.
Gene,
2003, 316,
79-89
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Moe, A.; Ringvoll, J.; Nordstrand, L.M.; Eide, L.; Bjørås, M.; Seeberg, E.; Rognes, T. & Klungland, A.
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V.
Nucleic Acids Res,
2003, 31,
3893-900
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Nygaard, V.; Løland, A.; Holden, M.; Langaas, M.; Rue, H.; Liu, F.; Myklebost, O.; Fodstad, Ø.; Hovig, E. & Sørensen, B.S.
Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance.
BMC Genomics,
2003, 4,
11
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Puntervoll, P.; Linding, R.; Gemünd, C.; Davidson, S.C.; Mattingsdal, M.; Cameron, S.; Martin, D.M.A.; Ausiello, G.; Brannetti, B.; Costantini, A.; Ferrè, F.; Maselli, V.; Via, A.; Cesareni, G.; Diella, F.; Furga, G.S.; Wyrwicz, L.; Ramu, C.; McGuigan, C.; Gudavalli, R.; Letunic, I.; Bork, P.; Rychlewski, L.; Küster, B.; Citterich, M.H.; Hunter, W.N.; Aasland, R. & Gibson, T.J.
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.
Nucleic Acids Res,
2003, 31,
3625-30
|
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Tøstesen, E.; Liu, F.; Jenssen, T. & Hovig, E.
Speed-up of DNA melting algorithm with complete nearest neighbor properties.
Biopolymers,
2003, 70,
364-76
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Wang, J.; Bø, T.H.; Jonassen, I.; Myklebost, O. & Hovig, E.
Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray data.
BMC Bioinformatics,
2003, 4,
60
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Wang, J.; Myklebost, O. & Hovig, E.
MGraph: graphical models for microarray data analysis.
Bioinformatics,
2003, 19,
2210-1
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