FUGE bioinformatics platform FUGE
 
Platform partners:
UiB
UiO
NTNU
Research:
Recent publications
Online tools:
BOMP
ELM
Ka/Ks calculation
LIPO
Pratt
RegExpMaker
Spratt
WEBnm@
TMM@
XHM
ParAlign
Stitchprofiles
Genetools
siRNA
TargetBoost
BLAST
preAssemble

bioportal.uio.no
Databases:
CHRABCHRAB
TAEDTAED
PubGenePubgene
repairGenesrepairGenes
Software:
J-Express
Phyrex
SciCraft
Softparsmap
MassSorter
RBR and xsact
Widget Toolbox:
Alignment Conversion
Sequence Conversion
Tree Conversion
Alignment to coding
Site map

Bioinformatics platform in Bergen

The Bergen part of the FUGE bioinformatics platform is hosted by the Computational Biology Unit (CBU) which also coordinates the platform. Inge Jonassen, director of CBU, is the project leader of the platform.

Service group

The service group at CBU provides bioinformatics services to Norwegian researchers working on the functional genomics projects. Services include online web tools, provision of programming assistence, and hosting visitors. Online services are gradually being developed based on the research activity at the platform and requests we receive. We thus strongly encourage users of the platform to let us know about specific needs they might have.

Where are we?

Bioinformatics Platform
CBU/BCCS
Unifob As
Thormøhlensgt. 55
5008 Bergen
Norway

Who are we?

The leader of the service team is Nathalie Reuter. The other members of the service group are:

Pål Puntervoll
Svenn Helge Grindhaug
Anders Lanzén

Supporting partners:

- Norstruct:

The Norwegian Structural Biology Center (NORSTRUCT) and the Bioinformatics platform have complementary activities. NORSTRUCT is a national service and competence centre in structural biology, and aims at establishing reasonably high throughput structural biology facilities of high international standard for determination and analysis of the 3D-structures of biologically active macromolecules. The Centre is established through the Norwegian functional genomics initiative (FUGE) and it is financed by the FUGE-program and the University of Tromsø.

- PROBE:

The Norwegian Proteomics Center (PROBE) established in the new building for Basic Biological Science at the University of Bergen.